It is the responsibility of each researcher to prepare and label genomic DNA for genotyping analysis. For labeling protocols please refer to the Affymetrix Mapping/SNP Assay Manual specific to your GeneChip. The fragmented biotin-labeled DNA sample requirements for GenomeChip SNP product are listed in the chart below.
| Array name | 10K 2.0 | 100K set | 500K set | SNP 5.0 | SNP 6.0 |
| Submission Requirements |
18.4ug in 70ul |
36.73ug in 70ul |
82.64ug in 70ul |
298-358ug in 73ul |
298-358ug in 73ul |
The Genomics Resource lab will not perform QC analysis of fragmented biotin-labeled DNA samples submitted for microarray analysis, so it is advisable that each investigator performs an assessment of sample quality before sending samples to the lab.
All samples, GeneChips, and a fully completed sample submission form should be delivered to the DNA Array Lab, located in the Thomas Building, DE-740.
Affymetrix request forms:
If you are using a FHCRC project id for billing, please fill out the Internal request form.
If billing is to be submitted to the University of Washington or other external institution, fill out the External Request Form.
